STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
peaCQuinohemoprotein amine dehydrogenase, gamma subunit; Catalyzes the oxidative deamination of a wide range of aliphatic and aromatic amines. (107 aa)    
Predicted Functional Partners:
peaA
Quinohaemoprotein amine dehydrogenase, alpha subunit; Function experimentally demonstrated in the studied species; enzyme; Energymetabolism : Amino acids and amines.
   
 0.999
peaD
Quinohemoprotein amine dehydrogenase, beta subunit; Function experimentally demonstrated in the studied species; enzyme; Energymetabolism : Amino acids and amines.
  
  0.991
PP_5604
Putative subtilisin-like serine protease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Unknownfunction : Enzymes of unknown specificity.
     
 0.940
peaB
Quinohemoprotein amine dehydrogenase modification protein; Function experimentally demonstrated in the studied species; enzyme; Energymetabolism : Amino acids and amines.
  
    0.818
PP_3857
Homologs of previously reported genes of unknown function.
  
   0.503
PP_1581
BNR domain protein.
  
   0.502
PP_2669
Putative Outer membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
   0.500
PP_3852
Conserved protein of unknown function with BNR domain; Homologs of previously reported genes of unknown function; Unknown function.
   
   0.500
PP_5392
Conserved hypothetical protein containing WD40/YVTN repeat domain; Homologs of previously reported genes of unknown function; Unknown function.
   
   0.500
PP_5606
Conserved exported protein of unknown function with YVTN beta-propeller repeat; Homologs of previously reported genes of unknown function; Unknown function.
   
   0.500
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.