Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PP_3476Type II secretion system protein G. (128 aa)    
Predicted Functional Partners:
PP_3477
Putative secretion type II protein related to protein G; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; membrane component; Transport and binding proteins.
 
  
 
0.989
PP_3478
Putative Secretion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the bacterial secretin family.
  
 0.977
gspG
Putative protein secretion protein for export; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter; Transport and binding proteins.
 
  
  0.975
PP_3483
Putative Type II secretion system protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.974
PP_3475
Putative type II secretory pathway, pseudopilin pulG-related signal peptide protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure; Cellenvelope : Surface structures.
 
     0.968
xcpT
Type II secretion pathway protein XcpT.
 
  
 
0.930
xcpS
Type II secretion pathway protein XcpS.
 
  
 0.874
PP_3481
Homologs of previously reported genes of unknown function.
  
    0.871
csgF
Curli secretion and assembly outer membrane associated component; Function of homologous gene experimentally demonstrated in an other organism; putative membrane component; Transport and binding proteins.
       0.869
PP_3474
Putative Curli fiber protein CsgE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.869
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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