STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP_3635Putative Sulfonate ABC transporter, permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (251 aa)    
Predicted Functional Partners:
PP_3637
Putative Sulfonate ABC transporter, ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.997
PP_3636
Putative Sulfonate ABC transporter, periplasmic sulfonate-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.996
PP_3638
Putative Acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    0.963
PP_0171
ABC transporter, ATP-binding protein.
  
 0.871
tauB-I
ATP-binding taurine transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Centralintermediarymetabolism : Sulfur metabolism.
  
 0.867
PP_2094
Putative Nitrate-binding protein NasS; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 0.858
tauB-II
ATP-binding taurine transporter subunit; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family.
  
 0.850
PP_3211
ABC transporter, ATP-binding protein.
  
 0.843
PP_3639
Alkylhydroperoxidase AhpD domain protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
  
 0.840
PP_3229
Putative Periplasmic aliphatic sulfonate-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 0.745
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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