STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nhaA-IINa(+)/H(+) antiporter NhaA 2; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. (453 aa)    
Predicted Functional Partners:
PP_3959
Voltage-gated chloride channel family protein.
  
  
 0.548
PP_3007
Homologs of previously reported genes of unknown function.
  
    0.504
PP_4196
Homologs of previously reported genes of unknown function.
   
    0.497
betT-III
Choline/carnitine/betaine transporter BetTC; Function experimentally demonstrated in the studied genus; transporter; Transport and binding proteins; Belongs to the BCCT transporter (TC 2.A.15) family.
  
  
 0.446
PP_2444
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
  
 0.426
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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