Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
PP_3114 | PP_3965 | Transposase. | Transposase. | 0.494 |
PP_3501 | PP_3965 | Transposase. | Transposase. | 0.760 |
PP_3964 | PP_3965 | Transposase. | Transposase. | 0.897 |
PP_3964 | PP_3966 | Transposase. | Transposase. | 0.594 |
PP_3964 | PP_3967 | Transposase. | MutT/nudix family protein; Belongs to the Nudix hydrolase family. | 0.400 |
PP_3965 | PP_3114 | Transposase. | Transposase. | 0.494 |
PP_3965 | PP_3501 | Transposase. | Transposase. | 0.760 |
PP_3965 | PP_3964 | Transposase. | Transposase. | 0.897 |
PP_3965 | PP_3966 | Transposase. | Transposase. | 0.781 |
PP_3965 | PP_3967 | Transposase. | MutT/nudix family protein; Belongs to the Nudix hydrolase family. | 0.513 |
PP_3965 | PP_3981 | Transposase. | Transposase. | 0.764 |
PP_3965 | PP_4439 | Transposase. | Transposase. | 0.765 |
PP_3965 | PP_4443 | Transposase. | Transposase. | 0.770 |
PP_3965 | PP_4745 | Transposase. | Transposase. | 0.499 |
PP_3965 | PP_5396 | Transposase. | Transposase. | 0.762 |
PP_3966 | PP_3964 | Transposase. | Transposase. | 0.594 |
PP_3966 | PP_3965 | Transposase. | Transposase. | 0.781 |
PP_3966 | PP_3967 | Transposase. | MutT/nudix family protein; Belongs to the Nudix hydrolase family. | 0.513 |
PP_3967 | PP_3964 | MutT/nudix family protein; Belongs to the Nudix hydrolase family. | Transposase. | 0.400 |
PP_3967 | PP_3965 | MutT/nudix family protein; Belongs to the Nudix hydrolase family. | Transposase. | 0.513 |
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