rnhA protein (Pseudomonas putida KT2440) - STRING interaction network

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rnhA

Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (148 aa)

Predicted Functional Partners:

dnaQ

0.993

rnhB

0.950

PP_4143

0.867

ligB

0.866

rep

0.860

polA

0.847

gloB

0.828

guaD

0.824

dnaB

0.798

PP_3893

0.797

Your Current Organism:

Pseudomonas putida KT2440

NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PP_3893	dnaB	PP_3893	PP_4873	Putative Phage DNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	Replicative DNA helicase (ATPase); Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.	0.919
PP_3893	ligB	PP_3893	PP_4968	Putative Phage DNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	DNA ligase B; Catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. Belongs to the NAD-dependent DNA ligase family. LigB subfamily.	0.805
PP_3893	polA	PP_3893	PP_0123	Putative Phage DNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	DNA polymerase I, 5' -> 3' polymerase with 5' --> 3' and 3' --> 5' exonuclease activity; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.566
PP_3893	rep	PP_3893	PP_5264	Putative Phage DNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	Helicase a single-stranded DNA dependent ATPase; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.	0.446
PP_3893	rnhA	PP_3893	PP_4142	Putative Phage DNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.797
PP_4143	dnaQ	PP_4143	PP_4141	Homologs of previously reported genes of unknown function.	DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.	0.828
PP_4143	gloB	PP_4143	PP_4144	Homologs of previously reported genes of unknown function.	Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.	0.783
PP_4143	rnhA	PP_4143	PP_4142	Homologs of previously reported genes of unknown function.	Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.867
dnaB	PP_3893	PP_4873	PP_3893	Replicative DNA helicase (ATPase); Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.	Putative Phage DNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.	0.919
dnaB	ligB	PP_4873	PP_4968	Replicative DNA helicase (ATPase); Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.	DNA ligase B; Catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. Belongs to the NAD-dependent DNA ligase family. LigB subfamily.	0.620
dnaB	polA	PP_4873	PP_0123	Replicative DNA helicase (ATPase); Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.	DNA polymerase I, 5' -> 3' polymerase with 5' --> 3' and 3' --> 5' exonuclease activity; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.848
dnaB	rnhA	PP_4873	PP_4142	Replicative DNA helicase (ATPase); Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.	Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.798
dnaQ	PP_4143	PP_4141	PP_4143	DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.	Homologs of previously reported genes of unknown function.	0.828
dnaQ	gloB	PP_4141	PP_4144	DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.	Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.	0.784
dnaQ	ligB	PP_4141	PP_4968	DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.	DNA ligase B; Catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. Belongs to the NAD-dependent DNA ligase family. LigB subfamily.	0.458
dnaQ	polA	PP_4141	PP_0123	DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.	DNA polymerase I, 5' -> 3' polymerase with 5' --> 3' and 3' --> 5' exonuclease activity; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.660
dnaQ	rnhA	PP_4141	PP_4142	DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.	Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.993
dnaQ	rnhB	PP_4141	PP_1605	DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.	Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	0.512
gloB	PP_4143	PP_4144	PP_4143	Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.	Homologs of previously reported genes of unknown function.	0.783
gloB	dnaQ	PP_4144	PP_4141	Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.	DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.	0.784