Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ccoN-ICytochrome c oxidase subunit I, cbb3-type; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the heme-copper respiratory oxidase family. (474 aa)    
Predicted Functional Partners:
ccoO-I
Cytochrome c oxidase subunit, cbb3-type; Function of strongly homologous gene; enzyme.
 0.999
ccoP-I
Cytochrome c oxidase subunit, cbb3-type; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
 0.999
ccoO-II
Cytochrome c oxidase subunit, cbb3-type; Function of strongly homologous gene; enzyme.
 
 0.999
ccoQ-I
Cytochrome c oxidase subunit, cbb3-type; Function of strongly homologous gene; enzyme.
  
 
 0.994
ccoP-II
Cytochrome c oxidase subunit, cbb3-type; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
 
 0.992
katA
Catalase; Belongs to the catalase family.
      
 0.956
PP_0103
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 
 0.949
ccoN-II
Cytochrome c oxidase subunit I, cbb3-type; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the heme-copper respiratory oxidase family.
 
  
 
0.941
PP_4259
Iron-sulfur cluster-binding protein.
 
  
 0.929
PP_4263
Putative membrane-bounded cytochrome biogenesis cycZ-like domain, copper tolerance protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component; Energy metabolism.
 
   
 0.909
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.