STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fleSSensory box histidine kinase FleS. (405 aa)    
Predicted Functional Partners:
atoC
Two component system AtoC DNA-binding transcriptional activator; Function of homologous gene experimentally demonstrated in an other organism; regulator; Fattyacidandphospholipidmetabolism : Degradation.
 0.997
PP_4393
Putative chemotaxis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
 
 
 0.938
PP_4377
Putative Flagellin FlaG; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
   
 0.911
PP_4363
Sensor histidine kinase/response regulator.
 
 
 0.878
fliE
Flagellar hook-basal body complex protein FliE.
 
 
 0.872
fleQ
Transcriptional regulator FleQ.
 
 
 0.857
PP_5324
Response regulator.
 
   0.811
fliF
Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.802
fliL
Flagellar protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.800
fliK
Flagellar hook-length control protein FliK.
 
    0.799
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.