STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliTFlagellar protein; Function experimentally demonstrated in the studied genus; structure; Cellular processes. (97 aa)    
Predicted Functional Partners:
fliS
Flagellar chaperone, inhibits premature FliC assembly; Function experimentally demonstrated in the studied genus; factor; Cellenvelope : Surface structures.
  
  
 0.996
fliC
Flagellin, filament structural protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
  
 0.946
fliD
Flagellar filament capping protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
  
 0.944
PP_4377
Putative Flagellin FlaG; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.927
flgL
Flagellar hook-associated protein FlgL.
  
  
 0.852
fleQ
Transcriptional regulator FleQ.
     
 0.763
fleS
Sensory box histidine kinase FleS.
     
 0.584
fliK
Flagellar hook-length control protein FliK.
  
  
 0.567
flgK
Flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family.
  
  
 0.559
flgE
Flagellar hook protein FlgE.
      
 0.403
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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