Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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[Homology]
Score
PP_4470Putative transcriptional regulator (Arc domain-containing); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (108 aa)    
Predicted Functional Partners:
rpoE
RNA polymerase sigma E factor; Function of homologous gene experimentally demonstrated in an other organism; factor; Transcription; Belongs to the sigma-70 factor family. ECF subfamily.
      
 0.584
fleQ
Transcriptional regulator FleQ.
      
 0.584
algB
Alginate biosynthesis transcriptional regulatory protein AlgB; Positive regulator of the alginate biosynthetic gene algD.
      
 0.575
phnN
Ribose 1,5-bisphosphate phosphokinase; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP).
       0.555
PP_5693
Homologs of previously reported genes of unknown function; Unknown function.
       0.555
mucA
Sigma factor AlgU negative regulatory protein.
      
 0.547
uvrY
Two-componenent system BarA/UvrY - regulatory subunit; Function of homologous gene experimentally demonstrated in an other organism; regulator; Transcription.
      
 0.463
flgM
Negative regulator of flagellin synthesis FlgM.
   
    0.458
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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