STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hisPHistidine lysine / arginine / ornithine ABC transporter - ATP binding subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Aminoacidbiosynthesis : Aspartate family. (254 aa)    
Predicted Functional Partners:
hisM
Histidine / lysine / arginine / ornithine ABC transporter - permease subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Aminoacidbiosynthesis : Aspartate family.
 
 0.995
hisQ
Histidine / lysine / arginine / ornithine ABC transporter - permease subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Aminoacidbiosynthesis : Aspartate family.
 
 0.995
argT
Lysine / arginine / ornithine ABC transporter - periplasmic binding protein; Function of homologous gene experimentally demonstrated in an other organism; transporter; Aminoacidbiosynthesis : Aspartate family.
 
 0.979
sctS
Sulfur compound ABC transporter - permease subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Transport and binding proteins.
    0.974
artJ
L-arginine ABC transporter - periplasmic binding subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Aminoacidbiosynthesis : Glutamate family.
  
 0.930
PP_0656
Putative Amino acid ABC transporter, permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
    0.907
nikD
Nickel ABC transporter ATP-binding subunit; Part of the ABC transporter complex NikABCDE involved in nickel import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Nickel importer (TC 3.A.1.5.3) family.
 
    
0.906
PP_0280
Amino acid ABC transporter, permease protein.
  
 0.904
PP_0281
Amino acid ABC transporter, permease protein.
  
 0.868
PP_3594
Amino acid ABC transporter, membrane protein; Function experimentally demonstrated in the studied strain; transporter; Transportandbindingproteins : Amino acids, peptides and amines.
  
 0.858
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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