STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP_4524Putative Sodium-solute symporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (459 aa)    
Predicted Functional Partners:
putA
Proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
  
 0.972
betT-I
Choline transporter; Function experimentally demonstrated in the studied genus; transporter; Mobileandextrachromosomalelementfunctions : Transposon functions; Belongs to the BCCT transporter (TC 2.A.15) family.
   
  
 0.759
PP_4523
Putative Agmatinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the arginase family.
 
  
 0.742
PP_0709
Transporter, NCS1 nucleoside transporter family; Belongs to the purine-cytosine permease (2.A.39) family.
 
    0.670
PP_2611
Membrane protein of unknown function; No homology to any previously reported sequences.
      
 0.649
PP_0496
Sodium/alanine symporter.
  
  
 0.636
yjiY
Putative transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Cellularprocesses : Adaptations to atypical conditions.
 
    0.593
speB
Agmatinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Centralintermediarymetabolism : Polyamine biosynthesis; Belongs to the arginase family.
 
  
 0.469
proP
Osmosensory proline/betaine/H+ permease; Function of homologous gene experimentally demonstrated in an other organism; transporter; Aminoacidbiosynthesis : Glutamate family.
   
  
 0.459
PP_2100
Two-component sensor protein; Function of homologous gene experimentally demonstrated in an other organism; receptor.
  
 
 0.428
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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