Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PP_4526Putative MFS superfamily transporter precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Transport and binding proteins. (390 aa)    
Predicted Functional Partners:
PP_4525
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
     0.728
PP_1450
Putative Activation/secretion protein, TPS family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
   
 0.596
PP_1449
Homologs of previously reported genes of unknown function.
  
     0.540
yjbB
Na+/Pi-cotransporter; Function of homologous gene experimentally demonstrated in an other organism; transporter; Transport and binding proteins.
  
     0.527
PP_4851
Phosphate starvation-inducible protein, PSIF.
  
     0.487
PP_2634
Putative Cellulose synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.460
PP_3069
Outer membrane autotransporter.
  
     0.443
yhjG
Uncharacterized protein YhjG; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
  
     0.443
ybhN
Phospholipid modification enzyme; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
     0.421
PP_2638
Putative Cellulose synthase operon C protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.407
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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