Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PP_4624Putative hydrolase, alpha/beta fold family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Unknownfunction : Enzymes of unknown specificity. (301 aa)    
Predicted Functional Partners:
PP_2654
Putative Glutathione S-transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.664
PP_4302
Urea transporter.
  
     0.610
PP_1845
Enoyl-CoA hydratase/isomerase family protein.
  
 
  0.561
PP_4164
Alpha/beta hydrolase.
  
  
 0.549
PP_2308
Putative Acyl-CoA thioesterase II; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
  0.486
PP_1064
Hydrolase, alpha/beta fold family.
  
     0.479
PP_3926
Short-chain dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Biologicalprocesses : Scavenge (Catabolism).
  
  0.474
PP_3720
Putative NAD(P)H quinone oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.466
cidB
Anti-holin regulator of holin CidA; Function of homologous gene experimentally demonstrated in an other organism; regulator.
       0.458
cidA
Holin regulator of murein hydrolases; Function of homologous gene experimentally demonstrated in an other organism; regulator.
       0.458
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
Server load: low (24%) [HD]