STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP_4624Putative hydrolase, alpha/beta fold family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Unknownfunction : Enzymes of unknown specificity. (301 aa)    
Predicted Functional Partners:
PP_2654
Putative Glutathione S-transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.664
PP_4302
Urea transporter.
  
     0.610
PP_4164
Alpha/beta hydrolase.
  
  
 0.550
PP_1845
Enoyl-CoA hydratase/isomerase family protein.
  
 
 
 0.502
PP_0918
Putative 3-beta hydroxysteroid dehydrogenase/isomerase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
 0.483
PP_1064
Hydrolase, alpha/beta fold family.
  
     0.479
apaH
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
 0.477
PP_3720
Putative NAD(P)H quinone oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.466
cidB
Anti-holin regulator of holin CidA; Function of homologous gene experimentally demonstrated in an other organism; regulator.
       0.458
cidA
Holin regulator of murein hydrolases; Function of homologous gene experimentally demonstrated in an other organism; regulator.
       0.458
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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