STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP_4629Sensory box protein. (142 aa)    
Predicted Functional Partners:
PP_3758
Response regulator/sensor histidine kinase.
    
 0.901
PP_3672
Homologs of previously reported genes of unknown function.
 
      0.897
PP_3581
Homologs of previously reported genes of unknown function.
 
      0.883
PP_5263
GGDEF domain protein.
 
      0.881
PP_2557
Sensory box protein.
    
 0.876
hinT
Aminoacyl-adenylate hydrolase/purine nucleoside phosphoramidase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Biologicalprocesses : Maintain.
      
 0.857
PP_4173
Sensor histidine kinase/response regulator.
 
    
 0.840
PP_1144
Homologs of previously reported genes of unknown function.
 
      0.834
PP_1875
Sensor histidine kinase/response regulator.
 
    
 0.810
TpbB
Diguanylate cyclase; Function experimentally demonstrated in the studied genus; enzyme; Regulatory functions.
 
 
    0.803
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.