STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PP_4763GCN5-related N-acetyltransferase. (178 aa)    
Predicted Functional Partners:
PP_1924
Putative Phosphinothricin N-acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.970
PP_4761
Hydrolase, haloacid dehalogenase-like family.
  
  
 0.810
tesB
Acyl-CoA thioesterase II.
  
  
 0.802
mqsR
Motility quorum-sensing regulator / GCU-specific mRNA interferase toxin; Function of homologous gene experimentally demonstrated in an other organism; regulator; Transcription : Degradation of RNA.
      
 0.761
arsH
ArsH protein.
      
 0.714
PP_4764
Histone deacetylase family protein.
       0.652
PP_4765
Homologs of previously reported genes of unknown function.
       0.599
PP_0820
GCN5-related N-acetyltransferase.
 
     0.499
PP_5712
Homologs of previously reported genes of unknown function.
       0.484
suhB
Inositol monophosphatase / glycerol-2-phosphatase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the inositol monophosphatase superfamily.
 
      0.482
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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