Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PP_4824Sensor histidine kinase/response regulator. (923 aa)    
Predicted Functional Partners:
gacS
Sensor protein GacS.
 
0.998
PP_3413
Sensor histidine kinase/response regulator.
 
 
0.987
PP_3728
Sensor histidine kinase/response regulator.
 
 
0.983
PP_3761
Sensor histidine kinase/response regulator.
 
 
0.968
PP_2100
Two-component sensor protein; Function of homologous gene experimentally demonstrated in an other organism; receptor.
 
 
0.963
PP_3430
Sensory box histidine kinase/response regulator.
 
 
 0.960
PP_1695
Putative Sodium-solute symporter/sensory box histidine kinase/response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
 0.952
PP_2354
Sensory box histidine kinase/response regulator.
 
 
 0.952
PP_2683
Putative sensory box histidine kinase/response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 
0.951
PP_2505
GAF domain/GGDEF domain protein.
  
 0.922
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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