STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yhjGUncharacterized protein YhjG; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. (688 aa)    
Predicted Functional Partners:
PP_3145
Homologs of previously reported genes of unknown function.
  
     0.600
PP_4851
Phosphate starvation-inducible protein, PSIF.
  
    0.555
PP_2105
Homologs of previously reported genes of unknown function.
  
   0.492
ycfJ
Putative regulator of flagellation; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Unknown function.
 
     0.486
ybhN
Phospholipid modification enzyme; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
    0.480
PP_0086
Homologs of previously reported genes of unknown function.
   
    0.457
PP_1124
Homologs of previously reported genes of unknown function.
  
     0.445
PP_4526
Putative MFS superfamily transporter precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Transport and binding proteins.
  
    0.443
PP_3117
Putative protein involved in error-prone processing of DNA lesions; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor; DNAmetabolism : DNA replication, recombination, and repair.
  
     0.436
mtfA
Glucose-regulated peptidase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Biologicalprocesses : Control; Belongs to the MtfA family.
  
     0.429
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.