STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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PP_4870Azurin; Transfers electrons from cytochrome c551 to cytochrome oxidase. (149 aa)    
Predicted Functional Partners:
peaA
Quinohaemoprotein amine dehydrogenase, alpha subunit; Function experimentally demonstrated in the studied species; enzyme; Energymetabolism : Amino acids and amines.
      
 0.763
cumA
Multicopper oxidase; Function experimentally demonstrated in the studied species; enzyme.
     
 0.759
cusF
Probable exported copper efflux protein; Function of homologous gene experimentally demonstrated in an other organism; factor; Biologicalprocesses : Excrete.
      
 0.706
czrSA
Metal-sensor histidine kinase; Member of a two-component regulatory system.
      
 0.670
queF
NADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).
      
 0.654
oprG
Outer membrane protein OprG.
   
  
 0.652
PP_2943
Putative Cytochrome c551 peroxidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
  
 0.606
PP_2159
Copper-binding protein, plastocyanin/azurin family.
      
 0.584
cusA
Probable copper efflux transporter, CzcA family; Function of homologous gene experimentally demonstrated in an other organism; transporter; Biologicalprocesses : Excrete; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
      
 0.519
cyoE
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
      
 0.486
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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