STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutFProbable formiminoglutamate deiminase; Function experimentally demonstrated in the studied strain; putative enzyme; Fattyacidandphospholipidmetabolism : Degradation. (454 aa)    
Predicted Functional Partners:
hutG
N-formylglutamate deformylase; Function experimentally demonstrated in the studied strain; enzyme; Fattyacidandphospholipidmetabolism : Degradation.
 
 
 0.995
hutI
Imidazolonepropionase; Function experimentally demonstrated in the studied strain; enzyme; Fattyacidandphospholipidmetabolism : Degradation; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
 
 
 0.995
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
  
 0.974
hutC
Histidine utilization repressor.
  
 0.968
PP_5034
Uncharacterized 21.2 kDa protein in hutC 3'region.
 
    0.914
PP_3209
Isoxanthopterin deaminase.
  
   
 0.858
hutH
Histidine ammonia-lyase; Function experimentally demonstrated in the studied strain; enzyme; Fattyacidandphospholipidmetabolism : Degradation; Belongs to the PAL/histidase family.
 
  
 0.827
PP_3959
Voltage-gated chloride channel family protein.
  
  
 0.747
PP_0241
Transporter.
      
 0.741
PP_2489
Putative Xenobiotic reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
      
 0.483
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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