Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PP_5092Putative exported NLP/P60 protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (207 aa)    
Predicted Functional Partners:
ltg
Lytic transglycosylase.
 
  
 0.759
ftsX
Membrane component of the ABC transporter FtsEX involved in cellular division; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 
 0.632
PP_5091
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component; Unknown function.
       0.537
ftsE
Cytokinetic ring ABC transporter-like subunit - ATP-binding subunit; Part of the ABC transporter FtsEX involved in cellular division.
 
 
 0.536
prc
Tail-specific protease prc; Belongs to the peptidase S41A family.
    
 
 0.466
ctpA
Carboxy-terminal-processing protease; Belongs to the peptidase S41A family.
    
 
 0.466
PP_1577
Phage tail tape meausure protein, lambda family.
  
 
 0.445
PP_1121
OmpA family protein.
 
 
 0.443
PP_1128
OmpA family protein.
 
 
 0.434
PP_1122
OmpA family protein.
 
 
 0.426
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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