STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cadA-IIICadmium translocating P-type ATPase; Function experimentally demonstrated in the studied genus; transporter; Biologicalprocesses : Circulate. (750 aa)    
Predicted Functional Partners:
PP_5140
Transcriptional regulator, MerR family.
 
  
 0.954
PP_0928
K+-dependent Na+/Ca+ exchanger related-protein.
  
  
 0.840
mgtC
Magnesium transporter, MgtC family.
  
  
 0.839
PP_5138
Putative transcriptional regulator LysR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Biologicalprocesses : Control; Belongs to the LysR transcriptional regulatory family.
  
    0.779
PP_2646
Homologs of previously reported genes of unknown function.
   
  
 0.761
cadA-II
Cadmium translocating P-type ATPase; Function experimentally demonstrated in the studied genus; transporter; Biologicalprocesses : Circulate.
 
 
0.756
nfuA
Fe/S biogenesis protein NfuA; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
   
  
 0.734
PP_0588
Putative copper-binding chaperone; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor; Biologicalprocesses : Circulate.
 
 
 0.698
PP_0026
Putative cobalt/cadmium/zinc exporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Biologicalprocesses : Circulate.
  
  
 0.654
PP_5393
Putative metal-binding chaperone; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor; Biologicalprocesses : Circulate.
  
 
 0.641
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.