plpB protein (Pseudomonas putida KT2440) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

plpB

NLPA lipoprotein. (261 aa)

Predicted Functional Partners:

metI

0.998

metP

0.998

metN

0.985

metNB

0.985

PP_0221

0.918

metQ

0.901

PP_0180

0.863

PP_2556

0.743

mrpG

0.585

pydX

0.566

Your Current Organism:

Pseudomonas putida KT2440

NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PP_0180	PP_2556	PP_0180	PP_2556	Putative cytochrome c family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Chromate transporter.	0.815
PP_0180	mrpG	PP_0180	PP_2225	Putative cytochrome c family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Putative Multicomponent potassium-proton antiporter, subunit G; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.717
PP_0180	plpB	PP_0180	PP_5165	Putative cytochrome c family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	NLPA lipoprotein.	0.863
PP_0221	metI	PP_0221	PP_0113	Methionine ABC transporter periplasmic-binding lipoprotein (metQ-like protein); Function of homologous gene experimentally demonstrated in an other organism; transporter; Biologicalprocesses : Explore.	Methionine ABC transporter, permease protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.	0.994
PP_0221	metN	PP_0221	PP_0114	Methionine ABC transporter periplasmic-binding lipoprotein (metQ-like protein); Function of homologous gene experimentally demonstrated in an other organism; transporter; Biologicalprocesses : Explore.	Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.	0.986
PP_0221	metNB	PP_0221	PP_0220	Methionine ABC transporter periplasmic-binding lipoprotein (metQ-like protein); Function of homologous gene experimentally demonstrated in an other organism; transporter; Biologicalprocesses : Explore.	Methionine import ATP-binding protein metN2; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.	0.996
PP_0221	metP	PP_0221	PP_0219	Methionine ABC transporter periplasmic-binding lipoprotein (metQ-like protein); Function of homologous gene experimentally demonstrated in an other organism; transporter; Biologicalprocesses : Explore.	L,D-methionine D-methionine ABC transporter - permease subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Transportandbindingproteins : Amino acids, peptides and amines.	0.999
PP_0221	metQ	PP_0221	PP_0112	Methionine ABC transporter periplasmic-binding lipoprotein (metQ-like protein); Function of homologous gene experimentally demonstrated in an other organism; transporter; Biologicalprocesses : Explore.	Methionine ABC transporter, periplasmic binding protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.	0.920
PP_0221	plpB	PP_0221	PP_5165	Methionine ABC transporter periplasmic-binding lipoprotein (metQ-like protein); Function of homologous gene experimentally demonstrated in an other organism; transporter; Biologicalprocesses : Explore.	NLPA lipoprotein.	0.918
PP_2556	PP_0180	PP_2556	PP_0180	Chromate transporter.	Putative cytochrome c family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.815
PP_2556	plpB	PP_2556	PP_5165	Chromate transporter.	NLPA lipoprotein.	0.743
metI	PP_0221	PP_0113	PP_0221	Methionine ABC transporter, permease protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.	Methionine ABC transporter periplasmic-binding lipoprotein (metQ-like protein); Function of homologous gene experimentally demonstrated in an other organism; transporter; Biologicalprocesses : Explore.	0.994
metI	metN	PP_0113	PP_0114	Methionine ABC transporter, permease protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.	Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.	0.999
metI	metNB	PP_0113	PP_0220	Methionine ABC transporter, permease protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.	Methionine import ATP-binding protein metN2; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.	0.996
metI	metP	PP_0113	PP_0219	Methionine ABC transporter, permease protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.	L,D-methionine D-methionine ABC transporter - permease subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Transportandbindingproteins : Amino acids, peptides and amines.	0.906
metI	metQ	PP_0113	PP_0112	Methionine ABC transporter, permease protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.	Methionine ABC transporter, periplasmic binding protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.	0.998
metI	plpB	PP_0113	PP_5165	Methionine ABC transporter, permease protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.	NLPA lipoprotein.	0.998
metN	PP_0221	PP_0114	PP_0221	Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.	Methionine ABC transporter periplasmic-binding lipoprotein (metQ-like protein); Function of homologous gene experimentally demonstrated in an other organism; transporter; Biologicalprocesses : Explore.	0.986
metN	metI	PP_0114	PP_0113	Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.	Methionine ABC transporter, permease protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.	0.999
metN	metNB	PP_0114	PP_0220	Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.	Methionine import ATP-binding protein metN2; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.	0.908