Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PP_5166 | PP_5167 | PP_5166 | PP_5167 | Sigma-54 dependent transcriptional regulator. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.650 |
| PP_5166 | plpB | PP_5166 | PP_5165 | Sigma-54 dependent transcriptional regulator. | NLPA lipoprotein. | 0.505 |
| PP_5166 | rpoN | PP_5166 | PP_0952 | Sigma-54 dependent transcriptional regulator. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is responsible for the expression of the xylCAB operon and the xylS gene. The open complex (sigma-54 and core RNA polymerase) serves as the receptor for receipt of the melting signal from the remotely bound activator protein XylR for the expression of the xylCAB operon and xylS. | 0.800 |
| PP_5166 | ssuA | PP_5166 | PP_0237 | Sigma-54 dependent transcriptional regulator. | Aliphatic sulfonate ABC transporter - periplasmic binding protein / transport of isethionate; Function of homologous gene experimentally demonstrated in an other organism; transporter; Centralintermediarymetabolism : Sulfur metabolism. | 0.690 |
| PP_5167 | PP_5166 | PP_5167 | PP_5166 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Sigma-54 dependent transcriptional regulator. | 0.650 |
| PP_5167 | plpB | PP_5167 | PP_5165 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | NLPA lipoprotein. | 0.407 |
| plpB | PP_5166 | PP_5165 | PP_5166 | NLPA lipoprotein. | Sigma-54 dependent transcriptional regulator. | 0.505 |
| plpB | PP_5167 | PP_5165 | PP_5167 | NLPA lipoprotein. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.407 |
| rpoN | PP_5166 | PP_0952 | PP_5166 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is responsible for the expression of the xylCAB operon and the xylS gene. The open complex (sigma-54 and core RNA polymerase) serves as the receptor for receipt of the melting signal from the remotely bound activator protein XylR for the expression of the xylCAB operon and xylS. | Sigma-54 dependent transcriptional regulator. | 0.800 |
| ssuA | PP_5166 | PP_0237 | PP_5166 | Aliphatic sulfonate ABC transporter - periplasmic binding protein / transport of isethionate; Function of homologous gene experimentally demonstrated in an other organism; transporter; Centralintermediarymetabolism : Sulfur metabolism. | Sigma-54 dependent transcriptional regulator. | 0.690 |