| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| XF_0002 | XF_0136 | XF_0002 | XF_0136 | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | DNA polymerase III holoenzyme chi subunit; Similar to GI|2984772 (percent identity: 34 %/query alignment coverage: 101.4 %/subject alignment coverage: 100.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | 0.973 |
| XF_0002 | XF_0590 | XF_0002 | XF_0590 | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | Conserved hypothetical protein; Similar to SP|P76570 (percent identity: 36 %/query alignment coverage: 97.4 %/subject alignment coverage: 91.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder; Belongs to the DnaA family. HdA subfamily. | 0.973 |
| XF_0002 | XF_0676 | XF_0002 | XF_0676 | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | DNA polymerase III, delta subunit; Similar to SP|P52024 (percent identity: 35 %/query alignment coverage: 74.2 %/subject alignment coverage: 75.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | 0.999 |
| XF_0002 | XF_2178 | XF_0002 | XF_2178 | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | DNA polymerase III, delta subunit; Similar to SP|P28630 (percent identity: 29 %/query alignment coverage: 96.2 %/subject alignment coverage: 96.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | 0.995 |
| XF_0002 | dnaA | XF_0002 | XF_0001 | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | Chromosomal replication initiator; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids (By similarity). | 0.979 |
| XF_0002 | dnaE | XF_0002 | XF_0204 | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | DNA polymerase III, alpha chain; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The alpha chain is the DNA polymerase (By similarity); Belongs to the DNA polymerase type-C family. DnaE subfamily. | 0.994 |
| XF_0002 | dnaQ | XF_0002 | XF_2157 | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | DNA polymerase III, epsilon chain; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.993 |
| XF_0002 | dnaX | XF_0002 | XF_1807 | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | DNA polymerase III subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.994 |
| XF_0002 | mutS | XF_0002 | XF_1716 | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | Mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.976 |
| XF_0002 | polA | XF_0002 | XF_1103 | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.995 |
| XF_0136 | XF_0002 | XF_0136 | XF_0002 | DNA polymerase III holoenzyme chi subunit; Similar to GI|2984772 (percent identity: 34 %/query alignment coverage: 101.4 %/subject alignment coverage: 100.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | 0.973 |
| XF_0136 | XF_0676 | XF_0136 | XF_0676 | DNA polymerase III holoenzyme chi subunit; Similar to GI|2984772 (percent identity: 34 %/query alignment coverage: 101.4 %/subject alignment coverage: 100.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | DNA polymerase III, delta subunit; Similar to SP|P52024 (percent identity: 35 %/query alignment coverage: 74.2 %/subject alignment coverage: 75.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | 0.994 |
| XF_0136 | XF_2178 | XF_0136 | XF_2178 | DNA polymerase III holoenzyme chi subunit; Similar to GI|2984772 (percent identity: 34 %/query alignment coverage: 101.4 %/subject alignment coverage: 100.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | DNA polymerase III, delta subunit; Similar to SP|P28630 (percent identity: 29 %/query alignment coverage: 96.2 %/subject alignment coverage: 96.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | 0.993 |
| XF_0136 | dnaE | XF_0136 | XF_0204 | DNA polymerase III holoenzyme chi subunit; Similar to GI|2984772 (percent identity: 34 %/query alignment coverage: 101.4 %/subject alignment coverage: 100.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | DNA polymerase III, alpha chain; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The alpha chain is the DNA polymerase (By similarity); Belongs to the DNA polymerase type-C family. DnaE subfamily. | 0.993 |
| XF_0136 | dnaQ | XF_0136 | XF_2157 | DNA polymerase III holoenzyme chi subunit; Similar to GI|2984772 (percent identity: 34 %/query alignment coverage: 101.4 %/subject alignment coverage: 100.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | DNA polymerase III, epsilon chain; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.931 |
| XF_0136 | dnaX | XF_0136 | XF_1807 | DNA polymerase III holoenzyme chi subunit; Similar to GI|2984772 (percent identity: 34 %/query alignment coverage: 101.4 %/subject alignment coverage: 100.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | DNA polymerase III subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.993 |
| XF_0590 | XF_0002 | XF_0590 | XF_0002 | Conserved hypothetical protein; Similar to SP|P76570 (percent identity: 36 %/query alignment coverage: 97.4 %/subject alignment coverage: 91.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder; Belongs to the DnaA family. HdA subfamily. | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | 0.973 |
| XF_0590 | dnaA | XF_0590 | XF_0001 | Conserved hypothetical protein; Similar to SP|P76570 (percent identity: 36 %/query alignment coverage: 97.4 %/subject alignment coverage: 91.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder; Belongs to the DnaA family. HdA subfamily. | Chromosomal replication initiator; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids (By similarity). | 0.593 |
| XF_0676 | XF_0002 | XF_0676 | XF_0002 | DNA polymerase III, delta subunit; Similar to SP|P52024 (percent identity: 35 %/query alignment coverage: 74.2 %/subject alignment coverage: 75.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | 0.999 |
| XF_0676 | XF_0136 | XF_0676 | XF_0136 | DNA polymerase III, delta subunit; Similar to SP|P52024 (percent identity: 35 %/query alignment coverage: 74.2 %/subject alignment coverage: 75.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | DNA polymerase III holoenzyme chi subunit; Similar to GI|2984772 (percent identity: 34 %/query alignment coverage: 101.4 %/subject alignment coverage: 100.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | 0.994 |