XF_0201 protein (Xylella fastidiosa) - STRING interaction network

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Score

XF_0201

Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. (199 aa)

Predicted Functional Partners:

XF_0214

0.754

lptC

0.721

XF_1214

0.693

XF_1459

0.693

XF_0291

0.691

XF_0196

0.673

XF_2554

0.663

XF_1324

0.637

XF_0152

0.631

XF_2338

0.626

Your Current Organism:

Xylella fastidiosa

NCBI taxonomy Id: 160492
Other names: X. fastidiosa 9a5c, Xylella fastidiosa 9a5c

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
XF_0152	XF_0196	XF_0152	XF_0196	Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	Conserved hypothetical protein; Similar to GI\|5139534 (percent identity: 22 %/query alignment coverage: 92.5 %/subject alignment coverage: 93.1 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	0.603
XF_0152	XF_0201	XF_0152	XF_0201	Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	0.631
XF_0152	XF_0214	XF_0152	XF_0214	Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	Conserved hypothetical protein; Similar to GI\|987638 (percent identity: 27 %/query alignment coverage: 87.9 %/subject alignment coverage: 103.4 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	0.693
XF_0152	XF_0291	XF_0152	XF_0291	Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	0.646
XF_0152	XF_1214	XF_0152	XF_1214	Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: 267.	0.566
XF_0152	XF_1324	XF_0152	XF_1324	Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	0.765
XF_0152	XF_1459	XF_0152	XF_1459	Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	0.737
XF_0152	XF_2338	XF_0152	XF_2338	Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	Chorismate mutase; Similar to GI\|2622768 (percent identity: 29 %/query alignment coverage: 69.7 %/subject alignment coverage: 57.9 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	0.402
XF_0152	XF_2554	XF_0152	XF_2554	Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	0.638
XF_0152	lptC	XF_0152	XF_1411	Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA.	0.708
XF_0196	XF_0152	XF_0196	XF_0152	Conserved hypothetical protein; Similar to GI\|5139534 (percent identity: 22 %/query alignment coverage: 92.5 %/subject alignment coverage: 93.1 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	0.603
XF_0196	XF_0201	XF_0196	XF_0201	Conserved hypothetical protein; Similar to GI\|5139534 (percent identity: 22 %/query alignment coverage: 92.5 %/subject alignment coverage: 93.1 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	0.673
XF_0196	XF_0214	XF_0196	XF_0214	Conserved hypothetical protein; Similar to GI\|5139534 (percent identity: 22 %/query alignment coverage: 92.5 %/subject alignment coverage: 93.1 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	Conserved hypothetical protein; Similar to GI\|987638 (percent identity: 27 %/query alignment coverage: 87.9 %/subject alignment coverage: 103.4 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	0.726
XF_0196	XF_0291	XF_0196	XF_0291	Conserved hypothetical protein; Similar to GI\|5139534 (percent identity: 22 %/query alignment coverage: 92.5 %/subject alignment coverage: 93.1 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	0.637
XF_0196	XF_1214	XF_0196	XF_1214	Conserved hypothetical protein; Similar to GI\|5139534 (percent identity: 22 %/query alignment coverage: 92.5 %/subject alignment coverage: 93.1 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: 267.	0.736
XF_0196	XF_1324	XF_0196	XF_1324	Conserved hypothetical protein; Similar to GI\|5139534 (percent identity: 22 %/query alignment coverage: 92.5 %/subject alignment coverage: 93.1 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	0.578
XF_0196	XF_1459	XF_0196	XF_1459	Conserved hypothetical protein; Similar to GI\|5139534 (percent identity: 22 %/query alignment coverage: 92.5 %/subject alignment coverage: 93.1 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	0.490
XF_0196	XF_2338	XF_0196	XF_2338	Conserved hypothetical protein; Similar to GI\|5139534 (percent identity: 22 %/query alignment coverage: 92.5 %/subject alignment coverage: 93.1 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	Chorismate mutase; Similar to GI\|2622768 (percent identity: 29 %/query alignment coverage: 69.7 %/subject alignment coverage: 57.9 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	0.780
XF_0196	XF_2554	XF_0196	XF_2554	Conserved hypothetical protein; Similar to GI\|5139534 (percent identity: 22 %/query alignment coverage: 92.5 %/subject alignment coverage: 93.1 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	0.685
XF_0196	lptC	XF_0196	XF_1411	Conserved hypothetical protein; Similar to GI\|5139534 (percent identity: 22 %/query alignment coverage: 92.5 %/subject alignment coverage: 93.1 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.	Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA.	0.733