STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
XF_0211Anthranilate synthase component II; Similar to SP|P00901 (percent identity: 67 %/query alignment coverage: 99.0 %/subject alignment coverage: 97.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. (194 aa)    
Predicted Functional Partners:
trpE
Anthranilate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]
 0.999
trpD
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
 
 0.999
XF_0674
Anthranilate synthase component I; Similar to SP|P05378 (percent identity: 36 %/query alignment coverage: 95.4 %/subject alignment coverage: 93.3 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: -45.
 0.999
XF_1914
Anthranilate synthase component I; Similar to SP|O66849 (percent identity: 37 %/query alignment coverage: 78.9 %/subject alignment coverage: 79.6 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
 0.999
trpC
Indole-3-glycerol phosphate synthase; Similar to SP|P20577 (percent identity: 63 %/query alignment coverage: 99.2 %/subject alignment coverage: 94.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder; Belongs to the TrpC family.
  
 0.994
trpF
N-(5'-phosphoribosyl) anthranilate isomerase; Similar to SP|Q59649 (percent identity: 43 %/query alignment coverage: 89.1 %/subject alignment coverage: 96.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder; Belongs to the TrpF family.
  
 0.980
XF_2325
P-protein; Similar to GI|3153199 (percent identity: 75 %/query alignment coverage: 101.9 %/subject alignment coverage: 95.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
 
 
 0.940
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
 
 
 0.929
XF_1915
Anthranilate synthase component II; Similar to SP|P00901 (percent identity: 43 %/query alignment coverage: 92.8 %/subject alignment coverage: 97.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
  
  
 
0.911
XF_1141
Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate.
    
 0.903
Your Current Organism:
Xylella fastidiosa
NCBI taxonomy Id: 160492
Other names: X. fastidiosa 9a5c, Xylella fastidiosa 9a5c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.