STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
XF_0281Transport protein; Similar to GI|2635675 (percent identity: 24 %/query alignment coverage: 85.6 %/subject alignment coverage: 90.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. (389 aa)    
Predicted Functional Partners:
XF_0282
Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
       0.801
XF_0280
Leucine aminopeptidase; Similar to GI|2984306 (percent identity: 34 %/query alignment coverage: 73.6 %/subject alignment coverage: 72.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder; Belongs to the peptidase M17 family.
  
    0.758
XF_0283
Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
       0.758
XF_0284
Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
       0.665
XF_0588
Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
 
     0.446
XF_2574
Conserved hypothetical protein; Similar to GI|6459110 (percent identity: 38 %/query alignment coverage: 89.4 %/subject alignment coverage: 78.1 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
 
    0.410
Your Current Organism:
Xylella fastidiosa
NCBI taxonomy Id: 160492
Other names: X. fastidiosa 9a5c, Xylella fastidiosa 9a5c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.