STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
XF_0597Conserved hypothetical protein; Similar to GI|6459570 (percent identity: 30 %/query alignment coverage: 96.8 %/subject alignment coverage: 102.4 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. (218 aa)    
Predicted Functional Partners:
XF_0596
Conserved hypothetical protein; Similar to GI|6459571 (percent identity: 33 %/query alignment coverage: 69.0 %/subject alignment coverage: 61.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
   
 0.990
XF_0595
Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
 
   
 0.935
XF_0594
Thiamine biosynthesis lipoprotein ApbE precursor; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
 
     0.833
XF_0598
Conserved hypothetical protein; Similar to GI|2981041 (percent identity: 51 %/query alignment coverage: 99.6 %/subject alignment coverage: 101.3 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
 
     0.831
XF_0599
TonB-dependent receptor for iron transport; Similar to SP|P75780 (percent identity: 47 %/query alignment coverage: 96.3 %/subject alignment coverage: 98.3 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
 
  
 0.763
XF_2713
Conserved hypothetical protein; Similar to GI|3661500 (percent identity: 26 %/query alignment coverage: 29.7 %/subject alignment coverage: 38.6 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
 
     0.462
Your Current Organism:
Xylella fastidiosa
NCBI taxonomy Id: 160492
Other names: X. fastidiosa 9a5c, Xylella fastidiosa 9a5c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.