Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
XF_0653Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. (212 aa)    
Predicted Functional Partners:
XF_0654
Conserved hypothetical protein; Similar to GI|1742728 (percent identity: 31 %/query alignment coverage: 81.2 %/subject alignment coverage: 94.4 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
 
    
0.694
XF_2694
Cell division protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 
 0.683
XF_0652
Peptidyl-prolyl cis-trans isomerase; Similar to SP|P30856 (percent identity: 43 %/query alignment coverage: 100.6 %/subject alignment coverage: 81.6 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
       0.566
XF_0651
Transport protein; Similar to SP|P42107 (percent identity: 33 %/query alignment coverage: 97.2 %/subject alignment coverage: 104.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
       0.548
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
  
   
 0.470
XF_2695
ABC transporter ATP-binding protein; Similar to SP|P10115 (percent identity: 47 %/query alignment coverage: 94.3 %/subject alignment coverage: 96.8 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: 12.
 
 
 0.454
Your Current Organism:
Xylella fastidiosa
NCBI taxonomy Id: 160492
Other names: X. fastidiosa 9a5c, Xylella fastidiosa 9a5c
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.