Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| XF_0759 | XF_0761 | XF_0759 | XF_0761 | N-acetylmuramoyl-L-alanine amidase precursor; Similar to SP|Q46929 (percent identity: 45 %/query alignment coverage: 41.7 %/subject alignment coverage: 54.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | Conserved hypothetical protein; Similar to GI|5531457 (percent identity: 34 %/query alignment coverage: 86.2 %/subject alignment coverage: 92.9 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: -69. | 0.445 |
| XF_0759 | mutL | XF_0759 | XF_0760 | N-acetylmuramoyl-L-alanine amidase precursor; Similar to SP|Q46929 (percent identity: 45 %/query alignment coverage: 41.7 %/subject alignment coverage: 54.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.581 |
| XF_0759 | nnrE | XF_0759 | XF_0757 | N-acetylmuramoyl-L-alanine amidase precursor; Similar to SP|Q46929 (percent identity: 45 %/query alignment coverage: 41.7 %/subject alignment coverage: 54.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | Conserved hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair o [...] | 0.773 |
| XF_0761 | XF_0759 | XF_0761 | XF_0759 | Conserved hypothetical protein; Similar to GI|5531457 (percent identity: 34 %/query alignment coverage: 86.2 %/subject alignment coverage: 92.9 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: -69. | N-acetylmuramoyl-L-alanine amidase precursor; Similar to SP|Q46929 (percent identity: 45 %/query alignment coverage: 41.7 %/subject alignment coverage: 54.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | 0.445 |
| XF_0761 | mutL | XF_0761 | XF_0760 | Conserved hypothetical protein; Similar to GI|5531457 (percent identity: 34 %/query alignment coverage: 86.2 %/subject alignment coverage: 92.9 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: -69. | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.676 |
| XF_0761 | nnrE | XF_0761 | XF_0757 | Conserved hypothetical protein; Similar to GI|5531457 (percent identity: 34 %/query alignment coverage: 86.2 %/subject alignment coverage: 92.9 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: -69. | Conserved hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair o [...] | 0.409 |
| mutL | XF_0759 | XF_0760 | XF_0759 | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | N-acetylmuramoyl-L-alanine amidase precursor; Similar to SP|Q46929 (percent identity: 45 %/query alignment coverage: 41.7 %/subject alignment coverage: 54.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | 0.581 |
| mutL | XF_0761 | XF_0760 | XF_0761 | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | Conserved hypothetical protein; Similar to GI|5531457 (percent identity: 34 %/query alignment coverage: 86.2 %/subject alignment coverage: 92.9 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: -69. | 0.676 |
| mutL | nnrE | XF_0760 | XF_0757 | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | Conserved hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair o [...] | 0.708 |
| nnrE | XF_0759 | XF_0757 | XF_0759 | Conserved hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair o [...] | N-acetylmuramoyl-L-alanine amidase precursor; Similar to SP|Q46929 (percent identity: 45 %/query alignment coverage: 41.7 %/subject alignment coverage: 54.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | 0.773 |
| nnrE | XF_0761 | XF_0757 | XF_0761 | Conserved hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair o [...] | Conserved hypothetical protein; Similar to GI|5531457 (percent identity: 34 %/query alignment coverage: 86.2 %/subject alignment coverage: 92.9 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: -69. | 0.409 |
| nnrE | mutL | XF_0757 | XF_0760 | Conserved hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair o [...] | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.708 |