STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XF_0765Conserved hypothetical protein; Similar to GI|2822324 (percent identity: 41 %/query alignment coverage: 84.2 %/subject alignment coverage: 80.9 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. (146 aa)    
Predicted Functional Partners:
XF_0766
Conserved hypothetical protein; Similar to GI|2822322 (percent identity: 34 %/query alignment coverage: 97.0 %/subject alignment coverage: 80.4 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
     0.968
blh
Conserved hypothetical protein; Could play a role in cell adherence or biofilm development. Belongs to the metallo-beta-lactamase superfamily.
 
     0.845
XF_0764
Membrane protein; Similar to GI|6562818 (percent identity: 36 %/query alignment coverage: 92.8 %/subject alignment coverage: 99.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
     
 0.798
bigR
Transcriptional regulator (ArsR family); Represses an operon that comprises itself, XF_0764, XF_0765, XF_0766 and blh. Binds to a palindromic AT-rich sequence spanning the -10 region of the blh promoter and blocks transcription of the operon.
       0.790
cysNC
ATP sulfurylase, large subunit; ATP sulfurylase may be the GTPase, regulating ATP sulfurylase activity; In the N-terminal section; belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
   
    0.540
XF_0763
Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
       0.443
Your Current Organism:
Xylella fastidiosa
NCBI taxonomy Id: 160492
Other names: X. fastidiosa 9a5c, Xylella fastidiosa 9a5c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.