STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argBAcetylglutamate kinase; Similar to GI|2984288 (percent identity: 30 %/query alignment coverage: 61.2 %/subject alignment coverage: 98.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. (438 aa)    
Predicted Functional Partners:
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
  
  0.999
argH
Argininosuccinate lyase; Similar to GI|179083 (percent identity: 35 %/query alignment coverage: 89.4 %/subject alignment coverage: 86.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
 
     0.939
XF_2091
Conserved hypothetical protein; Similar to GI|2791516 (percent identity: 38 %/query alignment coverage: 95.4 %/subject alignment coverage: 97.8 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
     
  0.900
XF_2396
Aminotransferase; Similar to SP|O33267 (percent identity: 45 %/query alignment coverage: 91.3 %/subject alignment coverage: 90.4 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
     
  0.900
XF_1000
Acetylornithine deacetylase; Similar to SP|P23908 (percent identity: 28 %/query alignment coverage: 86.8 %/subject alignment coverage: 82.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
 
     0.882
argF
Ornithine carbamoyltransferase; Catalyzes the transfer of the carbamoyl group from carbamoyl phosphate to the delta-amino group of N(2)-acetyl-L-ornithine to produce N(2)-acetyl-L-citrulline. This is a step in an alternative arginine biosynthesis pathway. The enzyme has no activity with ornithine; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. AOTCase family.
 
     0.846
argG
Argininosuccinate synthase; Similar to SP|Q60174 (percent identity: 36 %/query alignment coverage: 97.3 %/subject alignment coverage: 98.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
 
     0.835
proB
Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.
 
     0.555
proA
Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
 
     0.474
Your Current Organism:
Xylella fastidiosa
NCBI taxonomy Id: 160492
Other names: X. fastidiosa 9a5c, Xylella fastidiosa 9a5c
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