STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XF_1068Conserved hypothetical protein; Similar to SP|P44000 (percent identity: 26 %/query alignment coverage: 70.8 %/subject alignment coverage: 77.1 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. (305 aa)    
Predicted Functional Partners:
XF_2394
Glutaredoxin-like protein; Similar to GI|3650389 (percent identity: 54 %/query alignment coverage: 26.2 %/subject alignment coverage: 29.9 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
 
 
 0.591
cysG
Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.
     
 0.579
nfuA
Conserved hypothetical protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
  
 
 0.547
erpA
Conserved hypothetical protein; Required for insertion of 4Fe-4S clusters for at least IspG.
  
 
 0.544
XF_1069
Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
       0.536
XF_1070
Succinate dehydrogenase, membrane anchor subunit; Similar to GI|3169722 (percent identity: 38 %/query alignment coverage: 88.7 %/subject alignment coverage: 95.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
       0.494
XF_1071
Succinate dehydrogenase, membrane anchor subunit; Similar to GI|3169723 (percent identity: 36 %/query alignment coverage: 96.1 %/subject alignment coverage: 91.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
       0.494
XF_1072
Succinate dehydrogenase, flavoprotein subunit; Similar to SP|P31038 (percent identity: 69 %/query alignment coverage: 99.7 %/subject alignment coverage: 99.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
       0.494
XF_2562
Conserved hypothetical protein; Similar to SP|P77667 (percent identity: 45 %/query alignment coverage: 92.0 %/subject alignment coverage: 84.4 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder; Belongs to the HesB/IscA family.
  
 
 0.494
XF_1073
Succinate dehydrogenase iron-sulfur protein; Similar to SP|Q59662 (percent identity: 70 %/query alignment coverage: 99.2 %/subject alignment coverage: 100.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
  
 0.482
Your Current Organism:
Xylella fastidiosa
NCBI taxonomy Id: 160492
Other names: X. fastidiosa 9a5c, Xylella fastidiosa 9a5c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.