STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XF_1084Partition protein; Similar to GI|5381403 (percent identity: 32 %/query alignment coverage: 86.9 %/subject alignment coverage: 86.4 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. (213 aa)    
Predicted Functional Partners:
XF_1087
Cardiolipin synthase; Similar to GI|4154695 (percent identity: 33 %/query alignment coverage: 53.7 %/subject alignment coverage: 69.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
 
     0.776
XF_1085
Conserved hypothetical protein; Similar to GI|5525061 (percent identity: 35 %/query alignment coverage: 91.8 %/subject alignment coverage: 84.9 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
       0.762
XF_1086
Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder; Belongs to the UPF0312 family.
       0.710
parB
Chromosome partitioning protein; Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication (By similarity).
 
 
 0.690
XF_0061
Transcriptional repressor; Similar to SP|P07674 (percent identity: 28 %/query alignment coverage: 64.9 %/subject alignment coverage: 65.1 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder; Belongs to the ParB family.
  
 
 0.560
XF_1783
Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
  
 
 0.522
XF_1784
Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
  
 
 0.522
XF_1083
Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
       0.458
XF_1796
Similar to SP|P06709 (percent identity: 40 %/query alignment coverage: 95.9 %/subject alignment coverage: 94.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
     
 0.420
XF_0403
Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
  
     0.404
Your Current Organism:
Xylella fastidiosa
NCBI taxonomy Id: 160492
Other names: X. fastidiosa 9a5c, Xylella fastidiosa 9a5c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.