Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| XF_0531 | XF_1614 | XF_0531 | XF_1614 | Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | Penicillin binding protein; Similar to SP|P39844 (percent identity: 39 %/query alignment coverage: 99.6 %/subject alignment coverage: 100.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | 0.406 |
| XF_1614 | XF_0531 | XF_1614 | XF_0531 | Penicillin binding protein; Similar to SP|P39844 (percent identity: 39 %/query alignment coverage: 99.6 %/subject alignment coverage: 100.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | 0.406 |
| XF_1614 | XF_1640 | XF_1614 | XF_1640 | Penicillin binding protein; Similar to SP|P39844 (percent identity: 39 %/query alignment coverage: 99.6 %/subject alignment coverage: 100.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | Ankyrin-like protein; Similar to SP|Q01485 (percent identity: 26 %/query alignment coverage: 81.1 %/subject alignment coverage: 46.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | 0.676 |
| XF_1614 | XF_2230 | XF_1614 | XF_2230 | Penicillin binding protein; Similar to SP|P39844 (percent identity: 39 %/query alignment coverage: 99.6 %/subject alignment coverage: 100.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | Penicillin binding protein 6 precursor; Similar to SP|P08506 (percent identity: 47 %/query alignment coverage: 90.2 %/subject alignment coverage: 89.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder; Belongs to the peptidase S11 family. | 0.927 |
| XF_1614 | anmK | XF_1614 | XF_0166 | Penicillin binding protein; Similar to SP|P39844 (percent identity: 39 %/query alignment coverage: 99.6 %/subject alignment coverage: 100.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | Conserved hypothetical protein; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family. | 0.415 |
| XF_1640 | XF_1614 | XF_1640 | XF_1614 | Ankyrin-like protein; Similar to SP|Q01485 (percent identity: 26 %/query alignment coverage: 81.1 %/subject alignment coverage: 46.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | Penicillin binding protein; Similar to SP|P39844 (percent identity: 39 %/query alignment coverage: 99.6 %/subject alignment coverage: 100.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | 0.676 |
| XF_2230 | XF_1614 | XF_2230 | XF_1614 | Penicillin binding protein 6 precursor; Similar to SP|P08506 (percent identity: 47 %/query alignment coverage: 90.2 %/subject alignment coverage: 89.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder; Belongs to the peptidase S11 family. | Penicillin binding protein; Similar to SP|P39844 (percent identity: 39 %/query alignment coverage: 99.6 %/subject alignment coverage: 100.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | 0.927 |
| anmK | XF_1614 | XF_0166 | XF_1614 | Conserved hypothetical protein; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family. | Penicillin binding protein; Similar to SP|P39844 (percent identity: 39 %/query alignment coverage: 99.6 %/subject alignment coverage: 100.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | 0.415 |