STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
XF_1673Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. (132 aa)    
Predicted Functional Partners:
XF_1674
Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
  
    0.803
XF_1675
Phage-related protein; Similar to GI|3249594 (percent identity: 29 %/query alignment coverage: 89.6 %/subject alignment coverage: 35.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
  
  
 0.801
XF_1676
Conserved hypothetical protein; Similar to SP|P44183 (percent identity: 30 %/query alignment coverage: 92.9 %/subject alignment coverage: 99.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
       0.742
XF_1669
Phage-related lysozyme; Similar to SP|Q37896 (percent identity: 43 %/query alignment coverage: 70.0 %/subject alignment coverage: 54.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
  
    0.545
XF_1670
Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
       0.538
XF_1671
Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
       0.538
XF_1672
Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
       0.538
Your Current Organism:
Xylella fastidiosa
NCBI taxonomy Id: 160492
Other names: X. fastidiosa 9a5c, Xylella fastidiosa 9a5c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.