STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XF_1997Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. (219 aa)    
Predicted Functional Partners:
XF_1957
TonB protein; Similar to GI|3978235 (percent identity: 26 %/query alignment coverage: 67.6 %/subject alignment coverage: 78.9 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
  
     0.712
XF_1998
DNA-binding protein; Similar to SP|P44966 (percent identity: 58 %/query alignment coverage: 80.0 %/subject alignment coverage: 72.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder; Belongs to the transcriptional regulatory Fis family.
       0.709
XF_1109
Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: 84.
  
     0.691
XF_2012
Conserved hypothetical protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
  
     0.669
XF_1996
Transcriptional regulator (PbsX family); Similar to SP|P03035 (percent identity: 35 %/query alignment coverage: 54.0 %/subject alignment coverage: 31.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: -6.
 
     0.667
XF_1947
Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
  
     0.649
XF_1482
Conserved hypothetical protein; Similar to GI|1929096 (percent identity: 30 %/query alignment coverage: 93.8 %/subject alignment coverage: 88.3 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
  
    0.648
XF_0588
Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
  
     0.642
XF_0583
Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
  
     0.605
XF_1608
Conserved hypothetical protein; Similar to SP|P51024 (percent identity: 27 %/query alignment coverage: 78.7 %/subject alignment coverage: 92.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
  
     0.592
Your Current Organism:
Xylella fastidiosa
NCBI taxonomy Id: 160492
Other names: X. fastidiosa 9a5c, Xylella fastidiosa 9a5c
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.