Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| XF_2253 | XF_2254 | XF_2253 | XF_2254 | Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | 0.757 |
| XF_2253 | XF_2256 | XF_2253 | XF_2256 | Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | 0.455 |
| XF_2253 | acsA | XF_2253 | XF_2255 | Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | Acetyl coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.545 |
| XF_2254 | XF_2253 | XF_2254 | XF_2253 | Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | 0.757 |
| XF_2254 | XF_2256 | XF_2254 | XF_2256 | Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | 0.464 |
| XF_2254 | acsA | XF_2254 | XF_2255 | Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | Acetyl coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.556 |
| XF_2256 | XF_2253 | XF_2256 | XF_2253 | Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | 0.455 |
| XF_2256 | XF_2254 | XF_2256 | XF_2254 | Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | 0.464 |
| XF_2256 | acsA | XF_2256 | XF_2255 | Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | Acetyl coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.634 |
| XF_2256 | mntP | XF_2256 | XF_2257 | Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | Conserved hypothetical protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family. | 0.406 |
| acsA | XF_2253 | XF_2255 | XF_2253 | Acetyl coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | 0.545 |
| acsA | XF_2254 | XF_2255 | XF_2254 | Acetyl coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | 0.556 |
| acsA | XF_2256 | XF_2255 | XF_2256 | Acetyl coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | 0.634 |
| mntP | XF_2256 | XF_2257 | XF_2256 | Conserved hypothetical protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family. | Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | 0.406 |