STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
glpKGlycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. (516 aa)    
Predicted Functional Partners:
XF_2266
Glycerol-3-phosphate dehydrogenase; Similar to SP|P52111 (percent identity: 54 %/query alignment coverage: 97.6 %/subject alignment coverage: 97.1 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
 0.998
XF_2267
Glycerol uptake facilitator protein; Similar to SP|P11244 (percent identity: 39 %/query alignment coverage: 94.2 %/subject alignment coverage: 92.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder; Belongs to the MIP/aquaporin (TC 1.A.8) family.
 
 
 0.996
plsB
Glycerol-3-phosphate acyltransferase; Similar to SP|P44857 (percent identity: 37 %/query alignment coverage: 90.9 %/subject alignment coverage: 97.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder; Belongs to the GPAT/DAPAT family.
     
 0.905
XF_1136
NADP-alcohol dehydrogenase; Similar to GI|6066457 (percent identity: 56 %/query alignment coverage: 97.4 %/subject alignment coverage: 97.4 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
    
  0.902
XF_1734
NADP-alcohol dehydrogenase; Similar to GI|6066457 (percent identity: 56 %/query alignment coverage: 99.4 %/subject alignment coverage: 98.3 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
    
  0.902
XF_1746
Alcohol dehydrogenase; Similar to SP|P75691 (percent identity: 81 %/query alignment coverage: 99.4 %/subject alignment coverage: 99.4 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
    
  0.902
XF_2389
Alcohol dehydrogenase; Similar to SP|P75691 (percent identity: 78 %/query alignment coverage: 99.4 %/subject alignment coverage: 99.4 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
    
  0.902
XF_1640
Ankyrin-like protein; Similar to SP|Q01485 (percent identity: 26 %/query alignment coverage: 81.1 %/subject alignment coverage: 46.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
   
  0.687
XF_1116
Bifunctional diaminopimelate decarboxylase/aspartate kinase; Similar to SP|P00861 (percent identity: 33 %/query alignment coverage: 43.4 %/subject alignment coverage: 89.8 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
   
 0.685
XF_0285
Heat shock protein; Similar to SP|P09376 (percent identity: 43 %/query alignment coverage: 97.3 %/subject alignment coverage: 98.7 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder; Belongs to the peptidase S1C family.
   
 0.548
Your Current Organism:
Xylella fastidiosa
NCBI taxonomy Id: 160492
Other names: X. fastidiosa 9a5c, Xylella fastidiosa 9a5c
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.