Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| XF_2298 | XF_2300 | XF_2298 | XF_2300 | Low molecular weight phosphotyrosine protein phosphatase; Similar to GI|257210 (percent identity: 40 %/query alignment coverage: 89.0 %/subject alignment coverage: 86.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | 0.479 |
| XF_2298 | XF_2301 | XF_2298 | XF_2301 | Low molecular weight phosphotyrosine protein phosphatase; Similar to GI|257210 (percent identity: 40 %/query alignment coverage: 89.0 %/subject alignment coverage: 86.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Polysaccharide export protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.616 |
| XF_2298 | kdsB | XF_2298 | XF_2299 | Low molecular weight phosphotyrosine protein phosphatase; Similar to GI|257210 (percent identity: 40 %/query alignment coverage: 89.0 %/subject alignment coverage: 86.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. | 0.855 |
| XF_2300 | XF_2298 | XF_2300 | XF_2298 | Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | Low molecular weight phosphotyrosine protein phosphatase; Similar to GI|257210 (percent identity: 40 %/query alignment coverage: 89.0 %/subject alignment coverage: 86.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.479 |
| XF_2300 | XF_2301 | XF_2300 | XF_2301 | Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | Polysaccharide export protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.422 |
| XF_2300 | kdsB | XF_2300 | XF_2299 | Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | 3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. | 0.479 |
| XF_2301 | XF_2298 | XF_2301 | XF_2298 | Polysaccharide export protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | Low molecular weight phosphotyrosine protein phosphatase; Similar to GI|257210 (percent identity: 40 %/query alignment coverage: 89.0 %/subject alignment coverage: 86.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.616 |
| XF_2301 | XF_2300 | XF_2301 | XF_2300 | Polysaccharide export protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | 0.422 |
| kdsB | XF_2298 | XF_2299 | XF_2298 | 3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. | Low molecular weight phosphotyrosine protein phosphatase; Similar to GI|257210 (percent identity: 40 %/query alignment coverage: 89.0 %/subject alignment coverage: 86.2 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.855 |
| kdsB | XF_2300 | XF_2299 | XF_2300 | 3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. | Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. | 0.479 |