STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XF_2586Outer membrane export factor; Similar to SP|P02930 (percent identity: 33 %/query alignment coverage: 98.0 %/subject alignment coverage: 89.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder. (452 aa)    
Predicted Functional Partners:
XF_2093
Precursor of drug resistance protein; Similar to SP|P31223 (percent identity: 42 %/query alignment coverage: 90.4 %/subject alignment coverage: 92.9 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.976
XF_2094
Multidrug-efflux transporter; Similar to SP|P24181 (percent identity: 50 %/query alignment coverage: 98.4 %/subject alignment coverage: 100.4 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
 
 0.969
XF_2384
Membrane fusion protein precursor; Similar to GI|1736780 (percent identity: 37 %/query alignment coverage: 94.6 %/subject alignment coverage: 85.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.851
XF_2585
protein-L-isoaspartate O-methyltransferase; Similar to SP|P24206 (percent identity: 34 %/query alignment coverage: 74.8 %/subject alignment coverage: 78.4 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
     
 0.810
XF_0244
Membrane fusion protein; Similar to GI|1399757 (percent identity: 25 %/query alignment coverage: 100.0 %/subject alignment coverage: 95.3 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.790
XF_2084
Component of multidrug efflux system; Similar to GI|1707644 (percent identity: 28 %/query alignment coverage: 97.3 %/subject alignment coverage: 86.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: 72; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.731
XF_1216
Colicin V secretion protein; Similar to SP|P22519 (percent identity: 25 %/query alignment coverage: 97.1 %/subject alignment coverage: 98.8 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
  
 
 0.713
XF_2398
Hemolysin secretion protein D; Similar to SP|P06739 (percent identity: 39 %/query alignment coverage: 101.1 %/subject alignment coverage: 100.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
  
 
 0.713
XF_0300
Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
  
 
 0.704
XF_0301
Hypothetical protein; identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder.
  
 
 0.704
Your Current Organism:
Xylella fastidiosa
NCBI taxonomy Id: 160492
Other names: X. fastidiosa 9a5c, Xylella fastidiosa 9a5c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.