STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAM99340.1Nitrogen regulation protein NtrX. (464 aa)    
Predicted Functional Partners:
GAM99341.1
Nitrogen regulation protein NtrY.
 
 0.974
GAN00432.1
Sensory box histidine kinase/response regulator.
  
 0.926
GAM98113.1
Two-component hybrid sensor and regulator.
 
 0.918
GAM99343.1
Nitrogen regulation protein NtrB.
 0.899
GAM97352.1
Signal transduction histidine kinase.
  
 0.868
GAM97017.1
Diguanylate cyclase/phosphodiesterase.
 
 0.842
GAM96571.1
Sensory box histidine kinase.
 
 0.832
GAM97854.1
Two-component sensor histidine kinase.
 
 0.827
GAM97706.1
RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.819
GAM96406.1
Hypothetical protein.
  
 0.801
Your Current Organism:
alpha proteobacterium U91i
NCBI taxonomy Id: 1605283
Other names: a. proteobacterium U9-1i, alpha proteobacterium U9-1i
Server load: low (20%) [HD]