STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
selDHypothetical protein; Synthesizes selenophosphate from selenide and ATP. (347 aa)    
Predicted Functional Partners:
KPM47801.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.997
KPM48640.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.924
KPM48882.1
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.921
KPM49333.1
Thioredoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.892
KPM48595.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.892
KPM49502.1
Cysteine sulfinate desulfinase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
   
 0.889
KPM48524.1
Molybdenum cofactor biosynthesis protein MoeB; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.671
KPM49914.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.624
KPM48632.1
Cytochrome D ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.556
KPM48995.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.554
Your Current Organism:
Jiulongibacter sediminis
NCBI taxonomy Id: 1605367
Other names: J. sediminis, Jiulongibacter sediminis Liu et al. 2016, KCTC 42153, Lacihabitans sp. MCCC 1A00733, Leadbetterella sp. JN14-9, MCCC 1A00733, strain JN14-9
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