STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPM47975.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (463 aa)    
Predicted Functional Partners:
pyrB
Aspartate carbamoyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
   
    0.791
KPM48973.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.743
KPM47807.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.713
KPM49452.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.661
KPM47084.1
Carbohydrate-binding protein SusD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.648
KPM49359.1
Carbamoyl phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.609
KPM48974.1
Histidinol phosphate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.601
carA
Carbamoyl phosphate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CarA family.
   
    0.600
KPM46836.1
Carbohydrate-binding protein SusC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.573
KPM47974.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.564
Your Current Organism:
Jiulongibacter sediminis
NCBI taxonomy Id: 1605367
Other names: J. sediminis, Jiulongibacter sediminis Liu et al. 2016, KCTC 42153, Lacihabitans sp. MCCC 1A00733, Leadbetterella sp. JN14-9, MCCC 1A00733, strain JN14-9
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