STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPM47665.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)    
Predicted Functional Partners:
KPM47855.1
ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.718
KPM47664.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.698
KPM48758.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.695
KPM50026.1
8-amino-7-oxononanoate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.659
KPM47722.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.640
KPM47663.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.631
KPM47723.1
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.618
KPM48460.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.613
fabZ
hydroxymyristoyl-ACP dehydratase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
     
 0.559
KPM48465.1
Zn-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
0.443
Your Current Organism:
Jiulongibacter sediminis
NCBI taxonomy Id: 1605367
Other names: J. sediminis, Jiulongibacter sediminis Liu et al. 2016, KCTC 42153, Lacihabitans sp. MCCC 1A00733, Leadbetterella sp. JN14-9, MCCC 1A00733, strain JN14-9
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