Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AIQ61742.1Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology. (224 aa)    
Predicted Functional Partners:
AIQ57446.1
Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.596
AIQ57504.1
Glutamate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.568
AIQ60949.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.475
AIQ61201.1
UDP-phosphate glucose phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.471
amj
Membrane protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
  
    0.434
AIQ58921.1
Disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DsbB family.
   
  
 0.422
AIQ60734.1
DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.417
AIQ58856.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.416
Your Current Organism:
Paenibacillus borealis
NCBI taxonomy Id: 160799
Other names: CCUG 43137, CIP 107056, DSM 13188, Paenibacillus borealis Elo et al. 2001, strain KK19
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