Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AIQ55849.1Phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (430 aa)    
Predicted Functional Partners:
AIQ55850.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.998
AIQ55851.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.977
AIQ55848.1
Citrate lyase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.963
AIQ55852.1
Carbamoyl-phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.963
AIQ55845.1
Chemical-damaging agent resistance protein C; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.889
AIQ55846.1
Tellurium resistance protein TerA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.857
AIQ55844.1
Chemical-damaging agent resistance protein C; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.835
AIQ55843.1
Stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.834
AIQ55842.1
Tellurite resistance TerB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.812
AIQ57547.1
Tellurium resistance protein TerA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.809
Your Current Organism:
Paenibacillus borealis
NCBI taxonomy Id: 160799
Other names: CCUG 43137, CIP 107056, DSM 13188, Paenibacillus borealis Elo et al. 2001, strain KK19
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