Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AIQ55900.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (97 aa)    
Predicted Functional Partners:
AIQ55901.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.949
AIQ55899.1
Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.941
AIQ58304.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.660
AIQ61462.1
Thiamine biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.598
AIQ56388.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.568
AIQ56618.1
DNAase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.559
AIQ58305.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.534
AIQ61427.1
Myristoyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.498
AIQ61429.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.487
AIQ61460.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.479
Your Current Organism:
Paenibacillus borealis
NCBI taxonomy Id: 160799
Other names: CCUG 43137, CIP 107056, DSM 13188, Paenibacillus borealis Elo et al. 2001, strain KK19
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.