Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AIQ56064.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0403 family. (144 aa)    
Predicted Functional Partners:
AIQ59056.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.836
bshC
Hypothetical protein; Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH.
  
   
 0.812
AIQ56026.1
General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.795
AIQ59518.1
N-acetyl-alpha-D-glucosaminyl L-malate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.780
AIQ59519.1
Deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.763
AIQ59748.1
Squalene-hopene cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.749
AIQ60947.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.741
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.
       0.723
AIQ58031.1
Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.715
AIQ56066.1
Lysophospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.573
Your Current Organism:
Paenibacillus borealis
NCBI taxonomy Id: 160799
Other names: CCUG 43137, CIP 107056, DSM 13188, Paenibacillus borealis Elo et al. 2001, strain KK19
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